Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SOX1O00570 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 Z69890.1-201ENST00000382990 339 ntBASIC16.44■□□□□ 0.22
SOX1O00570 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.44■□□□□ 0.22
SOX1O00570 AC130709.1-201ENST00000484779 1212 ntBASIC16.44■□□□□ 0.22
SOX1O00570 IGHEP1-201ENST00000521393 651 ntBASIC16.44■□□□□ 0.22
SOX1O00570 AC106820.3-201ENST00000561653 397 ntBASIC16.44■□□□□ 0.22
SOX1O00570 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 AL450472.2-201ENST00000603663 1156 ntBASIC16.44■□□□□ 0.22
SOX1O00570 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.44■□□□□ 0.22
SOX1O00570 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.44■□□□□ 0.22
SOX1O00570 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
SOX1O00570 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SOX1O00570 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SOX1O00570 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SOX1O00570 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SOX1O00570 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SOX1O00570 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SOX1O00570 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SOX1O00570 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SOX1O00570 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SOX1O00570 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.43■□□□□ 0.22
SOX1O00570 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SOX1O00570 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.43■□□□□ 0.22
SOX1O00570 AP003398.1-201ENST00000531124 318 ntBASIC16.43■□□□□ 0.22
SOX1O00570 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.43■□□□□ 0.22
SOX1O00570 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.43■□□□□ 0.22
SOX1O00570 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 MIR3677-201ENST00000578964 60 ntBASIC16.43■□□□□ 0.22
SOX1O00570 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SOX1O00570 AL132994.2-201ENST00000603120 687 ntBASIC16.43■□□□□ 0.22
SOX1O00570 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SOX1O00570 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SOX1O00570 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SOX1O00570 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SOX1O00570 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SOX1O00570 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SOX1O00570 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SOX1O00570 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SOX1O00570 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SOX1O00570 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SOX1O00570 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.43■□□□□ 0.22
SOX1O00570 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.42■□□□□ 0.22
SOX1O00570 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
SOX1O00570 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SOX1O00570 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.42■□□□□ 0.22
SOX1O00570 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.42■□□□□ 0.22
SOX1O00570 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.42■□□□□ 0.22
SOX1O00570 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
SOX1O00570 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 AL136309.1-201ENST00000403917 691 ntBASIC16.42■□□□□ 0.22
SOX1O00570 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.42■□□□□ 0.22
SOX1O00570 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 AC245100.5-201ENST00000452108 331 ntBASIC16.42■□□□□ 0.22
SOX1O00570 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.42■□□□□ 0.22
SOX1O00570 POU5F1P2-201ENST00000521750 823 ntBASIC16.42■□□□□ 0.22
SOX1O00570 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.42■□□□□ 0.22
SOX1O00570 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.42■□□□□ 0.22
SOX1O00570 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.42■□□□□ 0.22
SOX1O00570 AL109837.1-201ENST00000603272 613 ntBASIC16.42■□□□□ 0.22
SOX1O00570 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.42■□□□□ 0.22
SOX1O00570 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SOX1O00570 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.42■□□□□ 0.22
SOX1O00570 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SOX1O00570 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX1O00570 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms