Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 REXO1L8P-201ENST00000604378 1897 ntBASIC17.29■□□□□ 0.36
PITPNM1O00562 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.29■□□□□ 0.36
PITPNM1O00562 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.29■□□□□ 0.36
PITPNM1O00562 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PITPNM1O00562 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC17.29■□□□□ 0.36
PITPNM1O00562 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.29■□□□□ 0.36
PITPNM1O00562 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 CNN2P8-201ENST00000421872 913 ntBASIC17.29■□□□□ 0.36
PITPNM1O00562 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.29■□□□□ 0.36
PITPNM1O00562 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.29■□□□□ 0.36
PITPNM1O00562 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.29■□□□□ 0.36
PITPNM1O00562 AC026410.3-201ENST00000514280 936 ntBASIC17.29■□□□□ 0.36
PITPNM1O00562 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.29■□□□□ 0.36
PITPNM1O00562 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC17.29■□□□□ 0.36
PITPNM1O00562 MIR3615-201ENST00000581999 87 ntBASIC17.29■□□□□ 0.36
PITPNM1O00562 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 AC020923.1-201ENST00000624021 917 ntBASIC17.29■□□□□ 0.36
PITPNM1O00562 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 CASC19-208ENST00000641056 1292 ntBASIC17.29■□□□□ 0.36
PITPNM1O00562 CASC19-227ENST00000641411 1285 ntBASIC17.29■□□□□ 0.36
PITPNM1O00562 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.29■□□□□ 0.36
PITPNM1O00562 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PITPNM1O00562 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.29■□□□□ 0.36
PITPNM1O00562 REXO1L1P-202ENST00000608646 1974 ntBASIC17.29■□□□□ 0.36
PITPNM1O00562 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PITPNM1O00562 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PITPNM1O00562 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.29■□□□□ 0.36
PITPNM1O00562 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.28■□□□□ 0.36
PITPNM1O00562 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.28■□□□□ 0.36
PITPNM1O00562 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.28■□□□□ 0.36
PITPNM1O00562 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.28■□□□□ 0.36
PITPNM1O00562 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PITPNM1O00562 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.28■□□□□ 0.36
PITPNM1O00562 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PITPNM1O00562 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PITPNM1O00562 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.28■□□□□ 0.36
PITPNM1O00562 AL645638.1-201ENST00000440519 361 ntBASIC17.28■□□□□ 0.36
PITPNM1O00562 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.28■□□□□ 0.36
PITPNM1O00562 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.28■□□□□ 0.36
PITPNM1O00562 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.28■□□□□ 0.36
PITPNM1O00562 AC011352.1-201ENST00000512300 793 ntBASIC17.28■□□□□ 0.36
PITPNM1O00562 S100Z-202ENST00000513010 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.28■□□□□ 0.36
PITPNM1O00562 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC17.28■□□□□ 0.36
PITPNM1O00562 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC17.28■□□□□ 0.36
PITPNM1O00562 AC093813.1-201ENST00000605066 256 ntBASIC17.28■□□□□ 0.36
PITPNM1O00562 AC017037.4-201ENST00000624526 826 ntBASIC17.28■□□□□ 0.36
PITPNM1O00562 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.28■□□□□ 0.36
PITPNM1O00562 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.28■□□□□ 0.36
PITPNM1O00562 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PITPNM1O00562 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.28■□□□□ 0.36
PITPNM1O00562 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PITPNM1O00562 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
PITPNM1O00562 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PITPNM1O00562 AL121723.1-201ENST00000445194 1519 ntBASIC17.27■□□□□ 0.36
PITPNM1O00562 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PITPNM1O00562 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PITPNM1O00562 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PITPNM1O00562 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms