Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.44□□□□□ -0.26
SDCBPO00560 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.44□□□□□ -0.26
SDCBPO00560 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.44□□□□□ -0.26
SDCBPO00560 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.44□□□□□ -0.26
SDCBPO00560 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.44□□□□□ -0.26
SDCBPO00560 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.44□□□□□ -0.26
SDCBPO00560 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.44□□□□□ -0.26
SDCBPO00560 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SDCBPO00560 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SDCBPO00560 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SDCBPO00560 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.44□□□□□ -0.26
SDCBPO00560 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SDCBPO00560 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SDCBPO00560 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SDCBPO00560 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.44□□□□□ -0.26
SDCBPO00560 AGAP7P-201ENST00000582299 2062 ntBASIC13.44□□□□□ -0.26
SDCBPO00560 AGAP14-201ENST00000624701 2060 ntBASIC13.44□□□□□ -0.26
SDCBPO00560 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
SDCBPO00560 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.44□□□□□ -0.26
SDCBPO00560 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SDCBPO00560 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SDCBPO00560 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.44□□□□□ -0.26
SDCBPO00560 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.44□□□□□ -0.26
SDCBPO00560 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SDCBPO00560 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SDCBPO00560 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SDCBPO00560 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.44□□□□□ -0.26
SDCBPO00560 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.43□□□□□ -0.26
SDCBPO00560 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 AP001282.1-201ENST00000531301 1499 ntBASIC13.43□□□□□ -0.26
SDCBPO00560 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SDCBPO00560 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SDCBPO00560 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.43□□□□□ -0.26
SDCBPO00560 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.43□□□□□ -0.26
SDCBPO00560 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SDCBPO00560 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.43□□□□□ -0.26
SDCBPO00560 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SDCBPO00560 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SDCBPO00560 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.43□□□□□ -0.26
SDCBPO00560 AC023274.1-201ENST00000418278 595 ntBASIC13.43□□□□□ -0.26
SDCBPO00560 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SDCBPO00560 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.43□□□□□ -0.26
SDCBPO00560 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.43□□□□□ -0.26
SDCBPO00560 RARRES2P8-201ENST00000566335 367 ntBASIC13.43□□□□□ -0.26
SDCBPO00560 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.43□□□□□ -0.26
SDCBPO00560 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.43□□□□□ -0.26
SDCBPO00560 AC018892.3-201ENST00000623986 2499 ntBASIC13.43□□□□□ -0.26
SDCBPO00560 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SDCBPO00560 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.43□□□□□ -0.26
SDCBPO00560 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SDCBPO00560 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.43□□□□□ -0.26
SDCBPO00560 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SDCBPO00560 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.43□□□□□ -0.26
SDCBPO00560 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.43□□□□□ -0.26
SDCBPO00560 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.43□□□□□ -0.26
SDCBPO00560 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SDCBPO00560 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SDCBPO00560 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.42□□□□□ -0.26
SDCBPO00560 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.42□□□□□ -0.26
SDCBPO00560 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 LINC01101-201ENST00000622953 1884 ntBASIC13.42□□□□□ -0.26
SDCBPO00560 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.42□□□□□ -0.26
SDCBPO00560 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.42□□□□□ -0.26
SDCBPO00560 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.42□□□□□ -0.26
SDCBPO00560 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms