Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.91□□□□□ -0.02
UPK1AO00322 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.91□□□□□ -0.02
UPK1AO00322 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UPK1AO00322 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
UPK1AO00322 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1AO00322 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
UPK1AO00322 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1AO00322 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 SPDYE7P-202ENST00000420373 878 ntBASIC14.9□□□□□ -0.02
UPK1AO00322 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1AO00322 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.9□□□□□ -0.02
UPK1AO00322 PHKG1P2-201ENST00000457537 863 ntBASIC14.9□□□□□ -0.02
UPK1AO00322 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1AO00322 HLA-J-203ENST00000494367 1087 ntBASIC14.9□□□□□ -0.02
UPK1AO00322 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.9□□□□□ -0.02
UPK1AO00322 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.9□□□□□ -0.02
UPK1AO00322 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.9□□□□□ -0.02
UPK1AO00322 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
UPK1AO00322 MIR4313-201ENST00000580760 101 ntBASIC14.9□□□□□ -0.02
UPK1AO00322 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
UPK1AO00322 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.9□□□□□ -0.02
UPK1AO00322 RN7SL828P-201ENST00000607615 303 ntBASIC14.9□□□□□ -0.02
UPK1AO00322 AL133215.2-201ENST00000609242 977 ntBASIC14.9□□□□□ -0.02
UPK1AO00322 AL691403.2-201ENST00000618460 490 ntBASIC14.9□□□□□ -0.02
UPK1AO00322 LINC00628-201ENST00000628516 1289 ntBASIC14.9□□□□□ -0.02
UPK1AO00322 AC079781.4-201ENST00000641908 219 ntBASIC14.9□□□□□ -0.02
UPK1AO00322 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1AO00322 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1AO00322 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1AO00322 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1AO00322 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
UPK1AO00322 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1AO00322 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1AO00322 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1AO00322 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 AL035456.1-201ENST00000456064 1369 ntBASIC14.89□□□□□ -0.03
UPK1AO00322 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
UPK1AO00322 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1AO00322 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UPK1AO00322 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
UPK1AO00322 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.89□□□□□ -0.03
UPK1AO00322 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UPK1AO00322 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.89□□□□□ -0.03
UPK1AO00322 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.89□□□□□ -0.03
UPK1AO00322 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
UPK1AO00322 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1AO00322 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1AO00322 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.89□□□□□ -0.03
UPK1AO00322 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1AO00322 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms