Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 CIC-204ENST00000572681 8218 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.64□□□□□ -0.07
CCDC160A6NGH7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 ZBED1P1-201ENST00000502364 1930 ntBASIC14.64□□□□□ -0.07
CCDC160A6NGH7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC160A6NGH7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 FAM220CP-201ENST00000395253 831 ntBASIC14.63□□□□□ -0.07
CCDC160A6NGH7 HLA-F-220ENST00000434407 884 ntBASIC14.63□□□□□ -0.07
CCDC160A6NGH7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.63□□□□□ -0.07
CCDC160A6NGH7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 AL136038.4-201ENST00000603606 1261 ntBASIC14.63□□□□□ -0.07
CCDC160A6NGH7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 AC090114.2-201ENST00000608477 7054 ntBASIC14.63□□□□□ -0.07
CCDC160A6NGH7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.63□□□□□ -0.07
CCDC160A6NGH7 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.63□□□□□ -0.07
CCDC160A6NGH7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms