Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 AC004987.2-201ENST00000395959 1148 ntBASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 EEF1DP4-201ENST00000446006 880 ntBASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 MIR4525-201ENST00000580000 75 ntBASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA9Q9Y5G4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 CROCCP4-201ENST00000457096 498 ntBASIC14.71□□□□□ -0.05
PCDHGA9Q9Y5G4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms