Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB1Q9Y5F3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 AC022532.1-201ENST00000624563 1728 ntBASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 AC087499.6-201ENST00000411576 835 ntBASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 RN7SL618P-201ENST00000477850 296 ntBASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 AL512361.1-201ENST00000554200 418 ntBASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 AC044860.1-202ENST00000559481 777 ntBASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 AC097359.3-201ENST00000603982 1210 ntBASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 AC007431.3-201ENST00000623221 587 ntBASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHB1Q9Y5F3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDHB1Q9Y5F3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.71■□□□□ 0.1
PCDHB1Q9Y5F3 TMBIM7P-203ENST00000641617 1718 ntBASIC15.71■□□□□ 0.1
PCDHB1Q9Y5F3 BTBD7P1-201ENST00000447253 1453 ntBASIC15.71■□□□□ 0.1
PCDHB1Q9Y5F3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHB1Q9Y5F3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
PCDHB1Q9Y5F3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHB1Q9Y5F3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 AC112492.5-201ENST00000421897 457 ntBASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 RPS2P32-201ENST00000439199 892 ntBASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 SERBP1P3-201ENST00000459980 809 ntBASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 AL162274.1-201ENST00000617191 1098 ntBASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 AL391825.1-201ENST00000457671 1364 ntBASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB1Q9Y5F3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB1Q9Y5F3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms