Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 KRT18P13-201ENST00000400056 1290 ntBASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 AC068137.2-201ENST00000605408 478 ntBASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 AC092865.6-201ENST00000642101 219 ntBASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 AC091951.1-201ENST00000512854 2465 ntBASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 AL390755.1-201ENST00000623716 2027 ntBASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
R3HCC1Q9Y3T6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 AL671710.1-201ENST00000610245 2349 ntBASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 REXO1L8P-201ENST00000604378 1897 ntBASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
R3HCC1Q9Y3T6 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 AC112191.1-201ENST00000523689 701 ntBASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 GGT3P-204ENST00000453783 1664 ntBASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 AC069224.1-201ENST00000566372 1715 ntBASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms