Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 CICP23-201ENST00000605013 2741 ntBASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 LINC00528-201ENST00000600723 2160 ntBASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 BX842568.4-201ENST00000421222 227 ntBASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 GPS2P2-201ENST00000430745 888 ntBASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 BANF1P1-201ENST00000553684 263 ntBASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 AC018529.1-201ENST00000613063 361 ntBASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF11Q9Y3C5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 AC127383.1-201ENST00000444697 1800 ntBASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 UPF3AP3-201ENST00000420996 769 ntBASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 AL353705.2-201ENST00000428243 662 ntBASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 RBPMS2P1-201ENST00000437762 623 ntBASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 AP000344.2-201ENST00000512987 629 ntBASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 AC105021.1-202ENST00000570572 669 ntBASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 GRK6P1-201ENST00000400595 1711 ntBASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF11Q9Y3C5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms