Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 TARDBPP1-201ENST00000442013 1203 ntBASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 AC008494.3-201ENST00000606615 944 ntBASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 REXO1L1P-202ENST00000608646 1974 ntBASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CLIP2Q9UDT6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 PHKG1P2-201ENST00000457537 863 ntBASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 MEIS3P1-201ENST00000495167 958 ntBASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 AC055876.2-201ENST00000531834 546 ntBASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIP2Q9UDT6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLIP2Q9UDT6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.58
CLIP2Q9UDT6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CLIP2Q9UDT6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLIP2Q9UDT6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AL136379.1-201ENST00000623471 2642 ntBASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AC074338.1-201ENST00000416825 156 ntBASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 COX5BP8-201ENST00000416911 349 ntBASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 MEP1AP4-201ENST00000423244 1087 ntBASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms