Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.73■□□□□ 0.27
CISHQ9NSE2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 AC092384.3-202ENST00000564646 2873 ntBASIC16.72■□□□□ 0.27
CISHQ9NSE2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 AC023310.3-201ENST00000557027 670 ntBASIC16.72■□□□□ 0.27
CISHQ9NSE2 AC100756.1-201ENST00000562736 682 ntBASIC16.72■□□□□ 0.27
CISHQ9NSE2 AC138749.3-201ENST00000567691 622 ntBASIC16.72■□□□□ 0.27
CISHQ9NSE2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 AL391069.4-201ENST00000609583 481 ntBASIC16.72■□□□□ 0.27
CISHQ9NSE2 AC116165.1-201ENST00000611806 668 ntBASIC16.72■□□□□ 0.27
CISHQ9NSE2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CISHQ9NSE2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.72■□□□□ 0.27
CISHQ9NSE2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CISHQ9NSE2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CISHQ9NSE2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CISHQ9NSE2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CISHQ9NSE2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CISHQ9NSE2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CISHQ9NSE2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CISHQ9NSE2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 FAM207CP-201ENST00000443486 507 ntBASIC16.71■□□□□ 0.27
CISHQ9NSE2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 TPRX2P-201ENST00000535362 881 ntBASIC16.71■□□□□ 0.27
CISHQ9NSE2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 RN7SL204P-201ENST00000582831 262 ntBASIC16.71■□□□□ 0.27
CISHQ9NSE2 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 AC084364.1-201ENST00000551967 1556 ntBASIC16.71■□□□□ 0.27
CISHQ9NSE2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.71■□□□□ 0.27
CISHQ9NSE2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms