Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SALL1Q9NSC2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.77■□□□□ 0.59
SALL1Q9NSC2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SALL1Q9NSC2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SALL1Q9NSC2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
SALL1Q9NSC2 HCG11-201ENST00000411553 5696 ntBASIC18.77■□□□□ 0.59
SALL1Q9NSC2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 AC025181.2-201ENST00000606994 802 ntBASIC18.76■□□□□ 0.59
SALL1Q9NSC2 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SALL1Q9NSC2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 AC016694.1-201ENST00000434179 700 ntBASIC18.75■□□□□ 0.59
SALL1Q9NSC2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 AP001582.1-201ENST00000525856 295 ntBASIC18.75■□□□□ 0.59
SALL1Q9NSC2 KRT90P-201ENST00000549264 1064 ntBASIC18.75■□□□□ 0.59
SALL1Q9NSC2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SALL1Q9NSC2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms