Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC106820.3-201ENST00000561653 397 ntBASIC14.26□□□□□ -0.13
CHD8Q9HCK8 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC138466.3-201ENST00000619983 221 ntBASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC011471.3-201ENST00000623576 402 ntBASIC14.26□□□□□ -0.13
CHD8Q9HCK8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 BAK1P1-201ENST00000317045 636 ntBASIC14.26□□□□□ -0.13
CHD8Q9HCK8 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC108724.1-201ENST00000481669 352 ntBASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC008723.1-201ENST00000506922 207 ntBASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 PSME2-217ENST00000615264 874 ntTSL 5 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 PSME2-218ENST00000630027 185 ntTSL 3 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 AC011462.4-201ENST00000616866 449 ntBASIC14.25□□□□□ -0.13
CHD8Q9HCK8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 GGT3P-204ENST00000453783 1664 ntBASIC14.25□□□□□ -0.13
CHD8Q9HCK8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 MBLAC2-202ENST00000514906 1936 ntBASIC14.25□□□□□ -0.13
CHD8Q9HCK8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 KRT17P5-201ENST00000332088 839 ntBASIC14.25□□□□□ -0.13
CHD8Q9HCK8 AC239868.1-201ENST00000369385 493 ntBASIC14.25□□□□□ -0.13
CHD8Q9HCK8 AL583805.1-201ENST00000391389 531 ntBASIC14.25□□□□□ -0.13
CHD8Q9HCK8 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.25□□□□□ -0.13
CHD8Q9HCK8 AC090510.3-201ENST00000615831 821 ntBASIC14.25□□□□□ -0.13
CHD8Q9HCK8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 AP003680.1-201ENST00000598970 3660 ntBASIC14.24□□□□□ -0.13
CHD8Q9HCK8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 CFL1P6-201ENST00000400899 494 ntBASIC14.24□□□□□ -0.13
CHD8Q9HCK8 PHKG1P2-201ENST00000457537 863 ntBASIC14.24□□□□□ -0.13
CHD8Q9HCK8 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms