Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VAT1LQ9HCJ6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.2■□□□□ 0.5
VAT1LQ9HCJ6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VAT1LQ9HCJ6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
VAT1LQ9HCJ6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VAT1LQ9HCJ6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.2■□□□□ 0.5
VAT1LQ9HCJ6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VAT1LQ9HCJ6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.2■□□□□ 0.5
VAT1LQ9HCJ6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 NME2P1-201ENST00000426182 414 ntBASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 FAM86LP-201ENST00000478302 853 ntBASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 AP005117.1-202ENST00000581724 1908 ntBASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 AC132872.4-202ENST00000622924 2756 ntBASIC18.19■□□□□ 0.5
VAT1LQ9HCJ6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 RN7SL752P-201ENST00000463779 287 ntBASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 RRP7BP-205ENST00000566851 833 ntBASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 AC036164.1-201ENST00000570544 333 ntBASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 AL121723.1-201ENST00000445194 1519 ntBASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.18■□□□□ 0.5
VAT1LQ9HCJ6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VAT1LQ9HCJ6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VAT1LQ9HCJ6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
VAT1LQ9HCJ6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
VAT1LQ9HCJ6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VAT1LQ9HCJ6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.17■□□□□ 0.5
VAT1LQ9HCJ6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
VAT1LQ9HCJ6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VAT1LQ9HCJ6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms