Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 AL031595.1-201ENST00000623969 4709 ntBASIC13.81□□□□□ -0.2
ELL3Q9HB65 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 AL589702.1-201ENST00000641229 1509 ntBASIC13.8□□□□□ -0.2
ELL3Q9HB65 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 BX842568.4-201ENST00000421222 227 ntBASIC13.8□□□□□ -0.2
ELL3Q9HB65 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 AC245100.5-201ENST00000452108 331 ntBASIC13.8□□□□□ -0.2
ELL3Q9HB65 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.8□□□□□ -0.2
ELL3Q9HB65 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ELL3Q9HB65 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.79□□□□□ -0.2
ELL3Q9HB65 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
ELL3Q9HB65 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.79□□□□□ -0.2
ELL3Q9HB65 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ELL3Q9HB65 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.79□□□□□ -0.2
ELL3Q9HB65 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ELL3Q9HB65 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.79□□□□□ -0.2
ELL3Q9HB65 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
ELL3Q9HB65 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.79□□□□□ -0.2
ELL3Q9HB65 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ELL3Q9HB65 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ELL3Q9HB65 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ELL3Q9HB65 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ELL3Q9HB65 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms