Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC125437.2-201ENST00000625180 2167 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AP003035.1-201ENST00000533748 1417 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 FCRLA-205ENST00000350710 1639 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC089987.2-201ENST00000328207 936 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 TBC1D3P3-201ENST00000342824 1080 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 OOEP-202ENST00000370363 1007 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 Y_RNA.618-201ENST00000410949 107 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 DEPDC4-203ENST00000416321 1155 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AL512649.1-201ENST00000428997 581 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC239727.1-201ENST00000431432 623 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 BUD31P2-201ENST00000449374 300 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 RPS4XP15-201ENST00000489210 795 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 RPS12P31-201ENST00000491419 398 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC010342.1-201ENST00000514047 877 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 PRR13P2-201ENST00000533804 406 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC024257.2-201ENST00000549699 147 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC012414.6-201ENST00000568241 401 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AL391497.1-201ENST00000608671 547 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AC011493.1-201ENST00000596753 1632 ntBASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 LIMCH1-210ENST00000509454 1506 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF3-205ENST00000413658 1441 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP3-3Q9BYR6 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC092720.2-201ENST00000602388 1665 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ANAPC10-217ENST00000613466 1674 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 SPP1-211ENST00000614857 1558 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AP004607.4-201ENST00000530158 1459 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 CDK20-203ENST00000375871 1907 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms