Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 MRPS18AP1-201ENST00000414458 589 ntBASIC11.02□□□□□ -0.65
UPK3BQ9BT76 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 RN7SL204P-201ENST00000582831 262 ntBASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LINC02560-201ENST00000596379 459 ntBASIC11.02□□□□□ -0.65
UPK3BQ9BT76 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 AL033527.5-202ENST00000641632 1098 ntBASIC11.02□□□□□ -0.65
UPK3BQ9BT76 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 CYP4F24P-201ENST00000586049 1580 ntBASIC11.02□□□□□ -0.65
UPK3BQ9BT76 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.02□□□□□ -0.65
UPK3BQ9BT76 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UPK3BQ9BT76 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AC236430.1-201ENST00000402231 743 ntBASIC11.01□□□□□ -0.65
UPK3BQ9BT76 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 EEF1DP4-201ENST00000446006 880 ntBASIC11.01□□□□□ -0.65
UPK3BQ9BT76 UGT1A2P-201ENST00000454886 866 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms