Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 HCG4-201ENST00000418983 998 ntBASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 BX005266.1-201ENST00000473402 457 ntBASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 BNIP3P18-201ENST00000593976 575 ntBASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 AL139424.1-201ENST00000607572 797 ntBASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC22CQ9BRL7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 MIR935-201ENST00000401179 91 ntBASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 BX664615.1-201ENST00000443558 458 ntBASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 AC245100.5-201ENST00000452108 331 ntBASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 MINOS1P3-201ENST00000457048 203 ntBASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 AC099521.3-201ENST00000624251 2938 ntBASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 AP001282.1-201ENST00000531301 1499 ntBASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC22CQ9BRL7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 AC018892.3-201ENST00000623986 2499 ntBASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms