Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 AC092580.3-201ENST00000430932 139 ntBASIC16.28■□□□□ 0.2
IFT43Q96FT9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 RN7SL204P-201ENST00000582831 262 ntBASIC16.28■□□□□ 0.2
IFT43Q96FT9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.28■□□□□ 0.2
IFT43Q96FT9 AC073592.8-201ENST00000624126 511 ntBASIC16.28■□□□□ 0.2
IFT43Q96FT9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFT43Q96FT9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.28■□□□□ 0.2
IFT43Q96FT9 AL691432.1-201ENST00000596308 1422 ntBASIC16.28■□□□□ 0.2
IFT43Q96FT9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 AC013268.4-201ENST00000637413 2228 ntBASIC16.27■□□□□ 0.2
IFT43Q96FT9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFT43Q96FT9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.27■□□□□ 0.2
IFT43Q96FT9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
IFT43Q96FT9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IFT43Q96FT9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IFT43Q96FT9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
IFT43Q96FT9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IFT43Q96FT9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IFT43Q96FT9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.27■□□□□ 0.19
IFT43Q96FT9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IFT43Q96FT9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.27■□□□□ 0.19
IFT43Q96FT9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.27■□□□□ 0.19
IFT43Q96FT9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.27■□□□□ 0.19
IFT43Q96FT9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 AC004987.2-201ENST00000395959 1148 ntBASIC16.26■□□□□ 0.19
IFT43Q96FT9 AC236430.1-201ENST00000402231 743 ntBASIC16.26■□□□□ 0.19
IFT43Q96FT9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 AC008761.3-201ENST00000624803 892 ntBASIC16.26■□□□□ 0.19
IFT43Q96FT9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 PRAL-201ENST00000624952 3286 ntBASIC16.26■□□□□ 0.19
IFT43Q96FT9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms