Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 MIR6069-201ENST00000620069 79 ntBASIC16.65■□□□□ 0.26
TRIM11Q96F44 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 DBET-201ENST00000630918 3363 ntBASIC16.65■□□□□ 0.26
TRIM11Q96F44 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.64■□□□□ 0.26
TRIM11Q96F44 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 AC148477.4-201ENST00000613430 1793 ntBASIC16.64■□□□□ 0.25
TRIM11Q96F44 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 CNN2P11-201ENST00000429351 262 ntBASIC16.64■□□□□ 0.25
TRIM11Q96F44 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 AC092865.5-201ENST00000545435 363 ntBASIC16.64■□□□□ 0.25
TRIM11Q96F44 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 AL589739.1-201ENST00000607720 493 ntBASIC16.64■□□□□ 0.25
TRIM11Q96F44 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 PCDHA3-202ENST00000532566 4594 ntBASIC16.64■□□□□ 0.25
TRIM11Q96F44 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM11Q96F44 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM11Q96F44 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms