Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 AL138725.1-201ENST00000407347 1314 ntBASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 AC010976.2-201ENST00000609697 852 ntBASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 EXOSC1-210ENST00000485122 564 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 ORAOV1P1-201ENST00000503108 395 ntBASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 MSANTD2P1-201ENST00000445341 1368 ntBASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 CLUHP2-201ENST00000426660 1303 ntBASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 BID-204ENST00000399767 2129 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 AC148476.1-201ENST00000622182 705 ntBASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNE2Q8WXH0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 ALDOAP2-201ENST00000398050 1076 ntBASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 NEU3-207ENST00000534628 746 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 BX322562.1-201ENST00000617004 561 ntBASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 AC133540.1-201ENST00000620845 1019 ntBASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 ASS1P1-201ENST00000402854 1237 ntBASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 AC068867.1-201ENST00000559855 150 ntBASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SYNE2Q8WXH0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms