Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CFAP61Q8NHU2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CFAP61Q8NHU2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.04■□□□□ 0.16
CFAP61Q8NHU2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CFAP61Q8NHU2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CFAP61Q8NHU2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 AC008267.7-201ENST00000624570 1194 ntBASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 AC007191.1-201ENST00000623179 2995 ntBASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 U82695.1-201ENST00000635752 1889 ntBASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CFAP61Q8NHU2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 AC022145.2-201ENST00000598203 171 ntBASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 AL691403.2-201ENST00000618460 490 ntBASIC16.02■□□□□ 0.16
CFAP61Q8NHU2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms