Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 AC127383.1-201ENST00000444697 1800 ntBASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
DNAAF3Q8N9W5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 GPS2P2-201ENST00000430745 888 ntBASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 MTND6P24-201ENST00000440466 518 ntBASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 SPDYE14P-201ENST00000442619 822 ntBASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 AC009093.7-201ENST00000623853 1223 ntBASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 AC023157.3-201ENST00000619086 2088 ntBASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.06■□□□□ 0.16
DNAAF3Q8N9W5 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 AC138035.3-201ENST00000622706 2791 ntBASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 AZGP1P1-201ENST00000411909 902 ntBASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 MIR6080-201ENST00000617359 66 ntBASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DNAAF3Q8N9W5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF3Q8N9W5 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms