Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 AC084364.1-201ENST00000551967 1556 ntBASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 CTBP2P3-201ENST00000585629 1255 ntBASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 AC027307.3-201ENST00000594262 1100 ntBASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C9orf40Q8IXQ3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AC092552.1-201ENST00000547243 906 ntBASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 BRI3BPP1-201ENST00000594224 787 ntBASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AL049840.4-201ENST00000602422 811 ntBASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 TMEM261P1-201ENST00000604899 340 ntBASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AC105233.6-201ENST00000642093 218 ntBASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 AC105917.1-201ENST00000506637 2539 ntBASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C9orf40Q8IXQ3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 RN7SL692P-201ENST00000464677 288 ntBASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 635.6 ms