Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 AC012441.1-201ENST00000446669 685 ntBASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 AC106760.1-201ENST00000508690 800 ntBASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 AL022328.1-201ENST00000610050 478 ntBASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBE3BQ7Z3V4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 AC134312.5-201ENST00000568031 1313 ntBASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE3BQ7Z3V4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms