Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 AC126177.1-201ENST00000547829 2218 ntBASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 AC055876.3-201ENST00000431496 288 ntBASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 INGX-202ENST00000489074 768 ntBASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 AC138649.4-201ENST00000612222 287 ntBASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP1BQ7LBR1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 TREML5P-201ENST00000421694 576 ntBASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 AC027369.6-201ENST00000525520 931 ntBASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 AC092364.2-202ENST00000597012 1073 ntBASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 AL158211.3-201ENST00000607385 239 ntBASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 FOXO1B-201ENST00000504678 1527 ntBASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP1BQ7LBR1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHMP1BQ7LBR1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms