Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 AL135744.1-201ENST00000565098 629 ntBASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 AL009178.2-201ENST00000597278 2719 ntBASIC14.42□□□□□ -0.1
SMARCD3Q6STE5 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 TFAMP1-201ENST00000412727 736 ntBASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 AL355306.1-201ENST00000415580 579 ntBASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 RPS8P6-201ENST00000426177 609 ntBASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 FAM86C2P-203ENST00000528684 1004 ntBASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 MIR4313-201ENST00000580760 101 ntBASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMARCD3Q6STE5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 CICP24-201ENST00000605464 2705 ntBASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 AC007686.3-201ENST00000619017 3487 ntBASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 TCAF2P1-201ENST00000291129 2421 ntBASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 FAM220BP-201ENST00000377689 816 ntBASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms