Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
CTR9Q6PD62 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.63■□□□□ 0.57
CTR9Q6PD62 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTR9Q6PD62 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 AL365203.3-201ENST00000609742 2057 ntBASIC18.63■□□□□ 0.57
CTR9Q6PD62 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTR9Q6PD62 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.63■□□□□ 0.57
CTR9Q6PD62 RN7SL837P-201ENST00000463010 287 ntBASIC18.63■□□□□ 0.57
CTR9Q6PD62 KRT18P43-201ENST00000469825 1281 ntBASIC18.63■□□□□ 0.57
CTR9Q6PD62 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.63■□□□□ 0.57
CTR9Q6PD62 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.63■□□□□ 0.57
CTR9Q6PD62 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.63■□□□□ 0.57
CTR9Q6PD62 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.63■□□□□ 0.57
CTR9Q6PD62 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CTR9Q6PD62 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTR9Q6PD62 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 AL442647.2-201ENST00000429864 857 ntBASIC18.62■□□□□ 0.57
CTR9Q6PD62 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTR9Q6PD62 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.62■□□□□ 0.57
CTR9Q6PD62 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 AL133267.1-201ENST00000398220 340 ntBASIC18.61■□□□□ 0.57
CTR9Q6PD62 AL512384.1-201ENST00000406683 331 ntBASIC18.61■□□□□ 0.57
CTR9Q6PD62 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 KRT17P7-201ENST00000451704 1104 ntBASIC18.61■□□□□ 0.57
CTR9Q6PD62 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms