Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CICP24-201ENST00000605464 2705 ntBASIC14.37□□□□□ -0.11
NIPAL3Q6P499 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 AC067930.6-201ENST00000623257 4947 ntBASIC14.37□□□□□ -0.11
NIPAL3Q6P499 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.36□□□□□ -0.11
NIPAL3Q6P499 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 AL353705.2-201ENST00000428243 662 ntBASIC14.36□□□□□ -0.11
NIPAL3Q6P499 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 AC004449.1-201ENST00000564240 433 ntBASIC14.36□□□□□ -0.11
NIPAL3Q6P499 AC018529.1-201ENST00000613063 361 ntBASIC14.36□□□□□ -0.11
NIPAL3Q6P499 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 AC091951.1-201ENST00000512854 2465 ntBASIC14.36□□□□□ -0.11
NIPAL3Q6P499 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NIPAL3Q6P499 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 SPDYE7P-202ENST00000420373 878 ntBASIC14.35□□□□□ -0.11
NIPAL3Q6P499 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NIPAL3Q6P499 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms