Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 AC013355.1-201ENST00000562625 723 ntBASIC19.44■□□□□ 0.7
RC3H1Q5TC82 DUX4L47-201ENST00000566374 394 ntBASIC19.44■□□□□ 0.7
RC3H1Q5TC82 AL133499.1-201ENST00000596207 608 ntBASIC19.44■□□□□ 0.7
RC3H1Q5TC82 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 U62317.3-201ENST00000608319 855 ntBASIC19.44■□□□□ 0.7
RC3H1Q5TC82 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RC3H1Q5TC82 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 AC021723.1-201ENST00000486306 515 ntBASIC19.43■□□□□ 0.7
RC3H1Q5TC82 NUP210P1-202ENST00000504322 710 ntBASIC19.43■□□□□ 0.7
RC3H1Q5TC82 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 PRKXP1-201ENST00000561423 1122 ntBASIC19.43■□□□□ 0.7
RC3H1Q5TC82 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 AL353726.2-201ENST00000623259 884 ntBASIC19.43■□□□□ 0.7
RC3H1Q5TC82 AC004923.1-202ENST00000642106 209 ntBASIC19.43■□□□□ 0.7
RC3H1Q5TC82 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 CLUHP2-201ENST00000426660 1303 ntBASIC19.43■□□□□ 0.7
RC3H1Q5TC82 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RC3H1Q5TC82 AL596087.1-201ENST00000400979 1969 ntBASIC19.43■□□□□ 0.7
RC3H1Q5TC82 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 ACTG1P2-201ENST00000415776 1125 ntBASIC19.42■□□□□ 0.7
RC3H1Q5TC82 ACTG1P11-201ENST00000425411 1125 ntBASIC19.42■□□□□ 0.7
RC3H1Q5TC82 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 TUBB8P8-201ENST00000458717 1058 ntBASIC19.42■□□□□ 0.7
RC3H1Q5TC82 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms