Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 KRT8P14-201ENST00000414254 1442 ntBASIC18.65■□□□□ 0.58
PDS5AQ29RF7 TUBB1P2-201ENST00000422712 1306 ntBASIC18.65■□□□□ 0.58
PDS5AQ29RF7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 TUBB1P1-201ENST00000503144 1300 ntBASIC18.65■□□□□ 0.58
PDS5AQ29RF7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 AL583810.1-201ENST00000553344 1045 ntBASIC18.65■□□□□ 0.58
PDS5AQ29RF7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 AC145423.3-201ENST00000615987 467 ntBASIC18.65■□□□□ 0.58
PDS5AQ29RF7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDS5AQ29RF7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDS5AQ29RF7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.64■□□□□ 0.58
PDS5AQ29RF7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 DUX4L45-201ENST00000566406 1057 ntBASIC18.64■□□□□ 0.57
PDS5AQ29RF7 SAMD11P1-201ENST00000571429 661 ntBASIC18.64■□□□□ 0.57
PDS5AQ29RF7 RN7SL48P-201ENST00000579283 293 ntBASIC18.64■□□□□ 0.57
PDS5AQ29RF7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDS5AQ29RF7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 CD8B2-202ENST00000417670 633 ntBASIC18.63■□□□□ 0.57
PDS5AQ29RF7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 AL603764.1-201ENST00000636452 321 ntBASIC18.63■□□□□ 0.57
PDS5AQ29RF7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDS5AQ29RF7 AC105250.1-201ENST00000509378 2057 ntBASIC18.63■□□□□ 0.57
PDS5AQ29RF7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 AC148477.4-201ENST00000613430 1793 ntBASIC18.62■□□□□ 0.57
PDS5AQ29RF7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms