Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 WASH7P-201ENST00000488147 1351 ntBASIC14.35□□□□□ -0.11
CACNA1BQ00975 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.35□□□□□ -0.11
CACNA1BQ00975 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.35□□□□□ -0.11
CACNA1BQ00975 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CACNA1BQ00975 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.35□□□□□ -0.11
CACNA1BQ00975 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.35□□□□□ -0.11
CACNA1BQ00975 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.35□□□□□ -0.11
CACNA1BQ00975 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CACNA1BQ00975 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC14.35□□□□□ -0.11
CACNA1BQ00975 MIR4640-201ENST00000581824 90 ntBASIC14.35□□□□□ -0.11
CACNA1BQ00975 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.35□□□□□ -0.11
CACNA1BQ00975 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.35□□□□□ -0.11
CACNA1BQ00975 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CACNA1BQ00975 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 TUBB8P12-201ENST00000308911 1335 ntBASIC14.34□□□□□ -0.11
CACNA1BQ00975 TUBB7P-202ENST00000428444 1305 ntBASIC14.34□□□□□ -0.11
CACNA1BQ00975 TUBB8P7-204ENST00000567960 1332 ntBASIC14.34□□□□□ -0.11
CACNA1BQ00975 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 AL354751.1-201ENST00000412768 1863 ntBASIC14.34□□□□□ -0.11
CACNA1BQ00975 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 AC092638.2-201ENST00000441105 947 ntBASIC14.34□□□□□ -0.11
CACNA1BQ00975 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 CHCHD2P9-201ENST00000461726 456 ntBASIC14.34□□□□□ -0.11
CACNA1BQ00975 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 AC124068.2-201ENST00000569473 1109 ntBASIC14.34□□□□□ -0.11
CACNA1BQ00975 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CACNA1BQ00975 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CACNA1BQ00975 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CACNA1BQ00975 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CACNA1BQ00975 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CACNA1BQ00975 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CACNA1BQ00975 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.33□□□□□ -0.11
CACNA1BQ00975 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.33□□□□□ -0.11
CACNA1BQ00975 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC14.33□□□□□ -0.11
CACNA1BQ00975 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CACNA1BQ00975 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.33□□□□□ -0.11
CACNA1BQ00975 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CACNA1BQ00975 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.33□□□□□ -0.12
CACNA1BQ00975 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.33□□□□□ -0.12
CACNA1BQ00975 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CACNA1BQ00975 FAM8A4P-201ENST00000435433 1213 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms