Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SKP1P63208 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.96□□□□□ -0.01
SKP1P63208 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.96□□□□□ -0.01
SKP1P63208 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.96□□□□□ -0.01
SKP1P63208 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SKP1P63208 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
SKP1P63208 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.96□□□□□ -0.01
SKP1P63208 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
SKP1P63208 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SKP1P63208 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
SKP1P63208 AC097359.3-201ENST00000603982 1210 ntBASIC14.96□□□□□ -0.01
SKP1P63208 AC008738.7-201ENST00000609744 511 ntBASIC14.96□□□□□ -0.01
SKP1P63208 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.96□□□□□ -0.01
SKP1P63208 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SKP1P63208 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.96□□□□□ -0.01
SKP1P63208 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.96□□□□□ -0.01
SKP1P63208 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.96□□□□□ -0.01
SKP1P63208 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.96□□□□□ -0.01
SKP1P63208 AC004461.2-201ENST00000629517 803 ntBASIC14.96□□□□□ -0.01
SKP1P63208 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.96□□□□□ -0.01
SKP1P63208 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SKP1P63208 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SKP1P63208 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SKP1P63208 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.96□□□□□ -0.01
SKP1P63208 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SKP1P63208 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SKP1P63208 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SKP1P63208 AL391825.1-201ENST00000457671 1364 ntBASIC14.96□□□□□ -0.02
SKP1P63208 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SKP1P63208 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SKP1P63208 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SKP1P63208 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SKP1P63208 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SKP1P63208 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SKP1P63208 AL365203.3-201ENST00000609742 2057 ntBASIC14.96□□□□□ -0.02
SKP1P63208 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SKP1P63208 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SKP1P63208 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SKP1P63208 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.95□□□□□ -0.02
SKP1P63208 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SKP1P63208 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.95□□□□□ -0.02
SKP1P63208 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SKP1P63208 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
SKP1P63208 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 AC010491.1-201ENST00000563101 2797 ntBASIC14.95□□□□□ -0.02
SKP1P63208 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SKP1P63208 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SKP1P63208 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.95□□□□□ -0.02
SKP1P63208 MEIS3P1-201ENST00000495167 958 ntBASIC14.95□□□□□ -0.02
SKP1P63208 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.95□□□□□ -0.02
SKP1P63208 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.95□□□□□ -0.02
SKP1P63208 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.95□□□□□ -0.02
SKP1P63208 DOC2GP-202ENST00000514950 1163 ntBASIC14.95□□□□□ -0.02
SKP1P63208 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.95□□□□□ -0.02
SKP1P63208 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SKP1P63208 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.95□□□□□ -0.02
SKP1P63208 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SKP1P63208 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SKP1P63208 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.95□□□□□ -0.02
SKP1P63208 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.95□□□□□ -0.02
SKP1P63208 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SKP1P63208 AC138969.3-201ENST00000546612 1459 ntBASIC14.95□□□□□ -0.02
SKP1P63208 AC138932.2-201ENST00000548268 1459 ntBASIC14.95□□□□□ -0.02
SKP1P63208 AC126755.4-201ENST00000549796 1459 ntBASIC14.95□□□□□ -0.02
SKP1P63208 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SKP1P63208 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SKP1P63208 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.94□□□□□ -0.02
SKP1P63208 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.94□□□□□ -0.02
SKP1P63208 AL607033.1-201ENST00000623900 1599 ntBASIC14.94□□□□□ -0.02
SKP1P63208 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 AP005117.1-202ENST00000581724 1908 ntBASIC14.94□□□□□ -0.02
SKP1P63208 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SKP1P63208 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SKP1P63208 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms