Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH11P55287 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDH11P55287 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 TFAMP1-201ENST00000412727 736 ntBASIC14.49□□□□□ -0.09
CDH11P55287 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH11P55287 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH11P55287 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH11P55287 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH11P55287 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH11P55287 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH11P55287 AL135744.1-201ENST00000565098 629 ntBASIC14.49□□□□□ -0.09
CDH11P55287 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.49□□□□□ -0.09
CDH11P55287 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
CDH11P55287 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH11P55287 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH11P55287 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH11P55287 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH11P55287 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH11P55287 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH11P55287 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH11P55287 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH11P55287 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH11P55287 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH11P55287 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDH11P55287 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH11P55287 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH11P55287 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CDH11P55287 AL009178.2-201ENST00000597278 2719 ntBASIC14.48□□□□□ -0.09
CDH11P55287 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH11P55287 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH11P55287 AL627223.1-201ENST00000416693 442 ntBASIC14.48□□□□□ -0.09
CDH11P55287 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH11P55287 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH11P55287 KRT8P48-201ENST00000515599 1220 ntBASIC14.48□□□□□ -0.09
CDH11P55287 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH11P55287 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH11P55287 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH11P55287 AL009183.1-201ENST00000603760 355 ntBASIC14.48□□□□□ -0.09
CDH11P55287 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH11P55287 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH11P55287 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH11P55287 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDH11P55287 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH11P55287 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH11P55287 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
CDH11P55287 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH11P55287 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH11P55287 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH11P55287 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CDH11P55287 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 AKAP8P1-201ENST00000434743 1349 ntBASIC14.47□□□□□ -0.09
CDH11P55287 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH11P55287 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH11P55287 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms