Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDH6P55285 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDH6P55285 RPL37AP1-201ENST00000412502 279 ntBASIC16.38■□□□□ 0.21
CDH6P55285 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH6P55285 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.38■□□□□ 0.21
CDH6P55285 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH6P55285 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH6P55285 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH6P55285 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH6P55285 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH6P55285 MIR6069-201ENST00000620069 79 ntBASIC16.38■□□□□ 0.21
CDH6P55285 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH6P55285 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH6P55285 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 TUBB3P1-201ENST00000405796 1332 ntBASIC16.38■□□□□ 0.21
CDH6P55285 KRT18P28-201ENST00000453838 1332 ntBASIC16.38■□□□□ 0.21
CDH6P55285 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CDH6P55285 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDH6P55285 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDH6P55285 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH6P55285 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH6P55285 AC023157.3-201ENST00000619086 2088 ntBASIC16.38■□□□□ 0.21
CDH6P55285 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDH6P55285 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH6P55285 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDH6P55285 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH6P55285 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CDH6P55285 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 TARDBPP1-201ENST00000442013 1203 ntBASIC16.37■□□□□ 0.21
CDH6P55285 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH6P55285 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH6P55285 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH6P55285 SPDYE12P-201ENST00000618416 771 ntBASIC16.37■□□□□ 0.21
CDH6P55285 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH6P55285 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDH6P55285 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH6P55285 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH6P55285 AC006486.2-201ENST00000624246 2199 ntBASIC16.37■□□□□ 0.21
CDH6P55285 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH6P55285 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH6P55285 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH6P55285 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH6P55285 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH6P55285 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH6P55285 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH6P55285 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CDH6P55285 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH6P55285 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH6P55285 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH6P55285 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH6P55285 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH6P55285 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH6P55285 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CDH6P55285 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.36■□□□□ 0.21
CDH6P55285 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH6P55285 AL645939.2-201ENST00000427340 991 ntBASIC16.36■□□□□ 0.21
CDH6P55285 METTL21AP1-201ENST00000438852 635 ntBASIC16.36■□□□□ 0.21
CDH6P55285 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH6P55285 SERBP1P3-201ENST00000459980 809 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms