Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
EPHA4P54764 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
EPHA4P54764 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
EPHA4P54764 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.12■□□□□ 0.01
EPHA4P54764 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
EPHA4P54764 AC092850.2-201ENST00000623821 2697 ntBASIC15.11■□□□□ 0.01
EPHA4P54764 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.11■□□□□ 0.01
EPHA4P54764 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
EPHA4P54764 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.11■□□□□ 0.01
EPHA4P54764 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
EPHA4P54764 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.11■□□□□ 0.01
EPHA4P54764 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.11■□□□□ 0.01
EPHA4P54764 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
EPHA4P54764 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
EPHA4P54764 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
EPHA4P54764 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
EPHA4P54764 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
EPHA4P54764 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.11■□□□□ 0.01
EPHA4P54764 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.11■□□□□ 0.01
EPHA4P54764 AC090142.2-201ENST00000483263 416 ntBASIC15.11■□□□□ 0.01
EPHA4P54764 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.11■□□□□ 0.01
EPHA4P54764 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.11■□□□□ 0.01
EPHA4P54764 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.11■□□□□ 0.01
EPHA4P54764 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.11■□□□□ 0.01
EPHA4P54764 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
EPHA4P54764 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.11■□□□□ 0.01
EPHA4P54764 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.11■□□□□ 0.01
EPHA4P54764 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.11■□□□□ 0.01
EPHA4P54764 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.11■□□□□ 0.01
EPHA4P54764 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.11■□□□□ 0.01
EPHA4P54764 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.11■□□□□ 0.01
EPHA4P54764 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.11■□□□□ 0.01
EPHA4P54764 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
EPHA4P54764 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 AC092364.2-201ENST00000596710 2692 ntBASIC15.1■□□□□ 0.01
EPHA4P54764 FLJ16779-201ENST00000612722 7638 ntBASIC15.1■□□□□ 0.01
EPHA4P54764 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.1■□□□□ 0.01
EPHA4P54764 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
EPHA4P54764 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 AC007950.2-201ENST00000615045 2347 ntBASIC15.1■□□□□ 0.01
EPHA4P54764 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.1■□□□□ 0.01
EPHA4P54764 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.1■□□□□ 0.01
EPHA4P54764 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.1■□□□□ 0.01
EPHA4P54764 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.1■□□□□ 0.01
EPHA4P54764 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.1■□□□□ 0.01
EPHA4P54764 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.1■□□□□ 0.01
EPHA4P54764 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.1■□□□□ 0.01
EPHA4P54764 AC026410.3-201ENST00000514280 936 ntBASIC15.1■□□□□ 0.01
EPHA4P54764 TDH-203ENST00000531764 1110 ntBASIC15.1■□□□□ 0.01
EPHA4P54764 PTP4A1P2-201ENST00000546033 454 ntBASIC15.1■□□□□ 0.01
EPHA4P54764 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.1■□□□□ 0.01
EPHA4P54764 AC093813.1-201ENST00000605066 256 ntBASIC15.1■□□□□ 0.01
EPHA4P54764 AL512343.1-201ENST00000605837 169 ntBASIC15.1■□□□□ 0.01
EPHA4P54764 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.1■□□□□ 0.01
EPHA4P54764 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms