Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ITGA8P53708 TFAMP1-201ENST00000412727 736 ntBASIC16.18■□□□□ 0.18
ITGA8P53708 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.18■□□□□ 0.18
ITGA8P53708 EEF1DP4-201ENST00000446006 880 ntBASIC16.18■□□□□ 0.18
ITGA8P53708 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.18■□□□□ 0.18
ITGA8P53708 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.18■□□□□ 0.18
ITGA8P53708 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.18■□□□□ 0.18
ITGA8P53708 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.18■□□□□ 0.18
ITGA8P53708 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.18■□□□□ 0.18
ITGA8P53708 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ITGA8P53708 AC097359.3-201ENST00000603982 1210 ntBASIC16.18■□□□□ 0.18
ITGA8P53708 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.18■□□□□ 0.18
ITGA8P53708 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.18■□□□□ 0.18
ITGA8P53708 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ITGA8P53708 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ITGA8P53708 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ITGA8P53708 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ITGA8P53708 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.18■□□□□ 0.18
ITGA8P53708 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ITGA8P53708 AC005089.1-201ENST00000619486 2241 ntBASIC16.18■□□□□ 0.18
ITGA8P53708 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
ITGA8P53708 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ITGA8P53708 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.18■□□□□ 0.18
ITGA8P53708 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.18■□□□□ 0.18
ITGA8P53708 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ITGA8P53708 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ITGA8P53708 MROH4P-201ENST00000431302 1578 ntBASIC16.17■□□□□ 0.18
ITGA8P53708 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA8P53708 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.17■□□□□ 0.18
ITGA8P53708 AC007191.1-201ENST00000623179 2995 ntBASIC16.17■□□□□ 0.18
ITGA8P53708 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA8P53708 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.17■□□□□ 0.18
ITGA8P53708 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA8P53708 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.17■□□□□ 0.18
ITGA8P53708 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA8P53708 AL355306.1-201ENST00000415580 579 ntBASIC16.17■□□□□ 0.18
ITGA8P53708 AL671277.1-201ENST00000429656 993 ntBASIC16.17■□□□□ 0.18
ITGA8P53708 AL139010.1-201ENST00000454878 894 ntBASIC16.17■□□□□ 0.18
ITGA8P53708 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.17■□□□□ 0.18
ITGA8P53708 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.17■□□□□ 0.18
ITGA8P53708 HNRNPUP1-201ENST00000554987 333 ntBASIC16.17■□□□□ 0.18
ITGA8P53708 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.17■□□□□ 0.18
ITGA8P53708 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.17■□□□□ 0.18
ITGA8P53708 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA8P53708 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA8P53708 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.17■□□□□ 0.18
ITGA8P53708 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ITGA8P53708 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 ZBED1P1-201ENST00000502364 1930 ntBASIC16.17■□□□□ 0.18
ITGA8P53708 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ITGA8P53708 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ITGA8P53708 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ITGA8P53708 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA8P53708 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.16■□□□□ 0.18
ITGA8P53708 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA8P53708 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.16■□□□□ 0.18
ITGA8P53708 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA8P53708 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA8P53708 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA8P53708 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.16■□□□□ 0.18
ITGA8P53708 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.16■□□□□ 0.18
ITGA8P53708 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ITGA8P53708 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA8P53708 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.16■□□□□ 0.18
ITGA8P53708 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA8P53708 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.16■□□□□ 0.18
ITGA8P53708 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
ITGA8P53708 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.16■□□□□ 0.18
ITGA8P53708 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA8P53708 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ITGA8P53708 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA8P53708 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA8P53708 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA8P53708 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.16■□□□□ 0.18
ITGA8P53708 RPL13AP23-201ENST00000480739 586 ntBASIC16.16■□□□□ 0.18
ITGA8P53708 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.16■□□□□ 0.18
ITGA8P53708 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms