Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CLCN3P51790 AP001582.1-201ENST00000525856 295 ntBASIC17.18■□□□□ 0.34
CLCN3P51790 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCN3P51790 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN3P51790 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCN3P51790 AC009486.1-201ENST00000569860 813 ntBASIC17.18■□□□□ 0.34
CLCN3P51790 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN3P51790 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCN3P51790 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.18■□□□□ 0.34
CLCN3P51790 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN3P51790 COX11-210ENST00000639671 696 ntBASIC17.18■□□□□ 0.34
CLCN3P51790 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN3P51790 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN3P51790 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN3P51790 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN3P51790 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN3P51790 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLCN3P51790 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLCN3P51790 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLCN3P51790 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN3P51790 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN3P51790 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 AC005229.1-201ENST00000392885 409 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 BOLA2P3-201ENST00000404566 256 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLCN3P51790 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN3P51790 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN3P51790 AL513523.2-202ENST00000427283 2040 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 RPS2P32-201ENST00000439199 892 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCN3P51790 AC012441.1-201ENST00000446669 685 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 KRT223P-202ENST00000449164 1292 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.17■□□□□ 0.34
CLCN3P51790 GAPDHP40-201ENST00000505218 1006 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 AC106760.1-201ENST00000508690 800 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCN3P51790 AC104989.1-201ENST00000519711 778 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN3P51790 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CLCN3P51790 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCN3P51790 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CLCN3P51790 AC093813.1-201ENST00000605066 256 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 AC133552.6-201ENST00000613406 534 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CLCN3P51790 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN3P51790 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN3P51790 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN3P51790 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN3P51790 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 AC134312.5-201ENST00000568031 1313 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN3P51790 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN3P51790 CICP13-201ENST00000422015 2789 ntBASIC17.17■□□□□ 0.34
CLCN3P51790 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN3P51790 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CLCN3P51790 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN3P51790 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN3P51790 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN3P51790 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN3P51790 PCDHA1-201ENST00000378133 2726 ntBASIC17.16■□□□□ 0.34
CLCN3P51790 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCN3P51790 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN3P51790 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN3P51790 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN3P51790 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN3P51790 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCN3P51790 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN3P51790 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCN3P51790 AL355864.2-201ENST00000447420 863 ntBASIC17.16■□□□□ 0.34
CLCN3P51790 CTBP2P5-201ENST00000454986 1264 ntBASIC17.16■□□□□ 0.34
CLCN3P51790 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN3P51790 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CLCN3P51790 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN3P51790 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CLCN3P51790 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN3P51790 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCN3P51790 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLCN3P51790 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCN3P51790 AC025181.2-201ENST00000606994 802 ntBASIC17.16■□□□□ 0.34
CLCN3P51790 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms