Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CENPAP49450 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CENPAP49450 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CENPAP49450 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.35□□□□□ -0.11
CENPAP49450 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.35□□□□□ -0.11
CENPAP49450 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.35□□□□□ -0.11
CENPAP49450 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.35□□□□□ -0.11
CENPAP49450 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.35□□□□□ -0.11
CENPAP49450 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.35□□□□□ -0.11
CENPAP49450 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CENPAP49450 AC134407.2-201ENST00000625089 1978 ntBASIC14.35□□□□□ -0.11
CENPAP49450 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CENPAP49450 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
CENPAP49450 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.35□□□□□ -0.11
CENPAP49450 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
CENPAP49450 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.35□□□□□ -0.11
CENPAP49450 AC106730.1-201ENST00000566722 1090 ntBASIC14.35□□□□□ -0.11
CENPAP49450 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.35□□□□□ -0.11
CENPAP49450 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.35□□□□□ -0.11
CENPAP49450 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CENPAP49450 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 AC020658.6-201ENST00000623564 1870 ntBASIC14.35□□□□□ -0.11
CENPAP49450 CICP4-201ENST00000447359 2812 ntBASIC14.35□□□□□ -0.11
CENPAP49450 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CENPAP49450 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CENPAP49450 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CENPAP49450 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.35□□□□□ -0.11
CENPAP49450 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CENPAP49450 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CENPAP49450 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.34□□□□□ -0.11
CENPAP49450 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.34□□□□□ -0.11
CENPAP49450 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.34□□□□□ -0.11
CENPAP49450 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CENPAP49450 FAM58CP-201ENST00000435741 640 ntBASIC14.34□□□□□ -0.11
CENPAP49450 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 AC098859.1-201ENST00000502915 1238 ntBASIC14.34□□□□□ -0.11
CENPAP49450 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.34□□□□□ -0.11
CENPAP49450 AC243562.2-201ENST00000561247 970 ntBASIC14.34□□□□□ -0.11
CENPAP49450 SPTSSB-204ENST00000617024 1292 ntBASIC14.34□□□□□ -0.11
CENPAP49450 FAM197Y3-203ENST00000618346 717 ntBASIC14.34□□□□□ -0.11
CENPAP49450 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.34□□□□□ -0.11
CENPAP49450 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms