Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MTHFRP42898 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MTHFRP42898 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 BTBD6P1-201ENST00000412176 1267 ntBASIC16.41■□□□□ 0.22
MTHFRP42898 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.41■□□□□ 0.22
MTHFRP42898 RN7SL190P-201ENST00000582519 257 ntBASIC16.41■□□□□ 0.22
MTHFRP42898 AL450472.2-201ENST00000603663 1156 ntBASIC16.41■□□□□ 0.22
MTHFRP42898 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.41■□□□□ 0.22
MTHFRP42898 AC244452.3-201ENST00000636814 210 ntBASIC16.41■□□□□ 0.22
MTHFRP42898 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
MTHFRP42898 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
MTHFRP42898 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MTHFRP42898 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.41■□□□□ 0.22
MTHFRP42898 LINC02199-201ENST00000506655 2702 ntBASIC16.41■□□□□ 0.22
MTHFRP42898 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.41■□□□□ 0.22
MTHFRP42898 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
MTHFRP42898 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MTHFRP42898 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.41■□□□□ 0.22
MTHFRP42898 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFRP42898 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
MTHFRP42898 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.4■□□□□ 0.22
MTHFRP42898 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.4■□□□□ 0.22
MTHFRP42898 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
MTHFRP42898 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.4■□□□□ 0.22
MTHFRP42898 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.4■□□□□ 0.22
MTHFRP42898 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.4■□□□□ 0.22
MTHFRP42898 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MTHFRP42898 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.4■□□□□ 0.22
MTHFRP42898 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 AC006001.1-201ENST00000325130 474 ntBASIC16.4■□□□□ 0.22
MTHFRP42898 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.4■□□□□ 0.22
MTHFRP42898 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.4■□□□□ 0.22
MTHFRP42898 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.4■□□□□ 0.22
MTHFRP42898 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.4■□□□□ 0.22
MTHFRP42898 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.4■□□□□ 0.22
MTHFRP42898 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.4■□□□□ 0.22
MTHFRP42898 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MTHFRP42898 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.4■□□□□ 0.22
MTHFRP42898 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.4■□□□□ 0.22
MTHFRP42898 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFRP42898 AL121723.1-201ENST00000445194 1519 ntBASIC16.4■□□□□ 0.22
MTHFRP42898 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.39■□□□□ 0.21
MTHFRP42898 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.39■□□□□ 0.21
MTHFRP42898 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 IGHJ2P-201ENST00000454480 60 ntBASIC16.39■□□□□ 0.21
MTHFRP42898 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.39■□□□□ 0.21
MTHFRP42898 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.39■□□□□ 0.21
MTHFRP42898 KRT18P25-201ENST00000508931 1278 ntBASIC16.39■□□□□ 0.21
MTHFRP42898 RNA5SP423-201ENST00000517127 109 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms