Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.68■□□□□ 0.26
PBX3P40426 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PBX3P40426 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PBX3P40426 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.68■□□□□ 0.26
PBX3P40426 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PBX3P40426 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.68■□□□□ 0.26
PBX3P40426 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.68■□□□□ 0.26
PBX3P40426 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 FAM86HP-204ENST00000513466 959 ntBASIC16.68■□□□□ 0.26
PBX3P40426 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PBX3P40426 AC079316.1-201ENST00000548397 411 ntBASIC16.68■□□□□ 0.26
PBX3P40426 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.68■□□□□ 0.26
PBX3P40426 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.68■□□□□ 0.26
PBX3P40426 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.68■□□□□ 0.26
PBX3P40426 AC138951.2-201ENST00000623455 1161 ntBASIC16.68■□□□□ 0.26
PBX3P40426 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.68■□□□□ 0.26
PBX3P40426 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PBX3P40426 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PBX3P40426 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PBX3P40426 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.67■□□□□ 0.26
PBX3P40426 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.67■□□□□ 0.26
PBX3P40426 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.67■□□□□ 0.26
PBX3P40426 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PBX3P40426 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PBX3P40426 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.67■□□□□ 0.26
PBX3P40426 GAPDHP40-201ENST00000505218 1006 ntBASIC16.67■□□□□ 0.26
PBX3P40426 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.67■□□□□ 0.26
PBX3P40426 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PBX3P40426 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.67■□□□□ 0.26
PBX3P40426 MIR4741-201ENST00000579822 90 ntBASIC16.67■□□□□ 0.26
PBX3P40426 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.67■□□□□ 0.26
PBX3P40426 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.67■□□□□ 0.26
PBX3P40426 AL118558.3-201ENST00000607414 1079 ntBASIC16.67■□□□□ 0.26
PBX3P40426 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PBX3P40426 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.67■□□□□ 0.26
PBX3P40426 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.67■□□□□ 0.26
PBX3P40426 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.67■□□□□ 0.26
PBX3P40426 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.67■□□□□ 0.26
PBX3P40426 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PBX3P40426 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.67■□□□□ 0.26
PBX3P40426 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PBX3P40426 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.67■□□□□ 0.26
PBX3P40426 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PBX3P40426 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.66■□□□□ 0.26
PBX3P40426 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 AL138799.1-201ENST00000448213 1675 ntBASIC16.66■□□□□ 0.26
PBX3P40426 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.66■□□□□ 0.26
PBX3P40426 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.66■□□□□ 0.26
PBX3P40426 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PBX3P40426 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.66■□□□□ 0.26
PBX3P40426 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.66■□□□□ 0.26
PBX3P40426 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.66■□□□□ 0.26
PBX3P40426 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PBX3P40426 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.66■□□□□ 0.26
PBX3P40426 MIR1247-201ENST00000408206 136 ntBASIC16.66■□□□□ 0.26
PBX3P40426 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.66■□□□□ 0.26
PBX3P40426 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.66■□□□□ 0.26
PBX3P40426 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms