Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SLC6A4P31645 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC6A4P31645 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.06■□□□□ 0.16
SLC6A4P31645 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC6A4P31645 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC6A4P31645 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC6A4P31645 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SLC6A4P31645 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC6A4P31645 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC6A4P31645 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC6A4P31645 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC6A4P31645 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC6A4P31645 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC6A4P31645 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SLC6A4P31645 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC6A4P31645 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC6A4P31645 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC6A4P31645 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC6A4P31645 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC6A4P31645 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SLC6A4P31645 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A4P31645 AC022188.1-201ENST00000620960 1664 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A4P31645 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC6A4P31645 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A4P31645 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 KRT8P22-201ENST00000562317 1415 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 AC007950.2-201ENST00000615045 2347 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A4P31645 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC6A4P31645 U91328.1-201ENST00000437528 223 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC6A4P31645 RPL13AP25-201ENST00000484130 612 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 AC026410.3-201ENST00000514280 936 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SLC6A4P31645 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A4P31645 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC6A4P31645 AC010319.3-201ENST00000597028 470 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 CU634019.7-201ENST00000624153 1185 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 FP236241.2-201ENST00000624906 1185 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A4P31645 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
SLC6A4P31645 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.05■□□□□ 0.16
SLC6A4P31645 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC6A4P31645 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLC6A4P31645 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A4P31645 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A4P31645 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A4P31645 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A4P31645 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC6A4P31645 AC105250.1-201ENST00000509378 2057 ntBASIC16.04■□□□□ 0.16
SLC6A4P31645 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms