Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RN7SL713P-201ENST00000582127 302 ntBASIC16.88■□□□□ 0.29
HOXC8P31273 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.88■□□□□ 0.29
HOXC8P31273 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HOXC8P31273 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.88■□□□□ 0.29
HOXC8P31273 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HOXC8P31273 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HOXC8P31273 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXC8P31273 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HOXC8P31273 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXC8P31273 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.87■□□□□ 0.29
HOXC8P31273 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HOXC8P31273 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXC8P31273 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.87■□□□□ 0.29
HOXC8P31273 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.87■□□□□ 0.29
HOXC8P31273 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXC8P31273 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 SCARNA20.5-201ENST00000516991 142 ntBASIC16.87■□□□□ 0.29
HOXC8P31273 AC106820.3-201ENST00000561653 397 ntBASIC16.87■□□□□ 0.29
HOXC8P31273 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.87■□□□□ 0.29
HOXC8P31273 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.87■□□□□ 0.29
HOXC8P31273 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HOXC8P31273 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
HOXC8P31273 AC244452.3-201ENST00000636814 210 ntBASIC16.87■□□□□ 0.29
HOXC8P31273 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HOXC8P31273 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.87■□□□□ 0.29
HOXC8P31273 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HOXC8P31273 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HOXC8P31273 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.87■□□□□ 0.29
HOXC8P31273 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.86■□□□□ 0.29
HOXC8P31273 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC8P31273 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
HOXC8P31273 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HOXC8P31273 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.86■□□□□ 0.29
HOXC8P31273 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC8P31273 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HOXC8P31273 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
HOXC8P31273 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC8P31273 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HOXC8P31273 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.86■□□□□ 0.29
HOXC8P31273 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC8P31273 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.86■□□□□ 0.29
HOXC8P31273 CHMP1AP1-201ENST00000445563 662 ntBASIC16.86■□□□□ 0.29
HOXC8P31273 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.86■□□□□ 0.29
HOXC8P31273 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC8P31273 COX5BP1-201ENST00000507622 393 ntBASIC16.86■□□□□ 0.29
HOXC8P31273 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.86■□□□□ 0.29
HOXC8P31273 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.86■□□□□ 0.29
HOXC8P31273 AC244157.2-201ENST00000616239 1006 ntBASIC16.86■□□□□ 0.29
HOXC8P31273 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.86■□□□□ 0.29
HOXC8P31273 AC068587.10-201ENST00000641210 219 ntBASIC16.86■□□□□ 0.29
HOXC8P31273 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.86■□□□□ 0.29
HOXC8P31273 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HOXC8P31273 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC8P31273 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HOXC8P31273 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOXC8P31273 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.86■□□□□ 0.29
HOXC8P31273 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.85■□□□□ 0.29
HOXC8P31273 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms