Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RXRBP28702 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RXRBP28702 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RXRBP28702 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RXRBP28702 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RXRBP28702 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RXRBP28702 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RXRBP28702 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.06■□□□□ 0.8
RXRBP28702 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
RXRBP28702 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRBP28702 FKBP4P6-201ENST00000457486 1332 ntBASIC20.05■□□□□ 0.8
RXRBP28702 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRBP28702 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRBP28702 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRBP28702 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRBP28702 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.05■□□□□ 0.8
RXRBP28702 AP000593.2-201ENST00000542775 1433 ntBASIC20.05■□□□□ 0.8
RXRBP28702 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20.05■□□□□ 0.8
RXRBP28702 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RXRBP28702 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RXRBP28702 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRBP28702 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RXRBP28702 AL807761.2-201ENST00000422849 729 ntBASIC20.05■□□□□ 0.8
RXRBP28702 AC004066.1-201ENST00000502488 802 ntBASIC20.05■□□□□ 0.8
RXRBP28702 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC20.05■□□□□ 0.8
RXRBP28702 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC20.05■□□□□ 0.8
RXRBP28702 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC20.05■□□□□ 0.8
RXRBP28702 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC20.05■□□□□ 0.8
RXRBP28702 AL353622.2-201ENST00000605846 425 ntBASIC20.05■□□□□ 0.8
RXRBP28702 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.05■□□□□ 0.8
RXRBP28702 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.05■□□□□ 0.8
RXRBP28702 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RXRBP28702 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RXRBP28702 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRBP28702 PCDHB18P-201ENST00000524813 2368 ntBASIC20.05■□□□□ 0.8
RXRBP28702 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RXRBP28702 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 AL008718.2-201ENST00000609206 1313 ntBASIC20.04■□□□□ 0.8
RXRBP28702 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.04■□□□□ 0.8
RXRBP28702 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RXRBP28702 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RXRBP28702 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.04■□□□□ 0.8
RXRBP28702 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.04■□□□□ 0.8
RXRBP28702 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 MRPL22P1-201ENST00000505398 616 ntBASIC20.04■□□□□ 0.8
RXRBP28702 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.04■□□□□ 0.8
RXRBP28702 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC20.04■□□□□ 0.8
RXRBP28702 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC20.04■□□□□ 0.8
RXRBP28702 AC010503.4-201ENST00000615487 688 ntBASIC20.04■□□□□ 0.8
RXRBP28702 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RXRBP28702 AC002472.3-201ENST00000640124 621 ntBASIC20.04■□□□□ 0.8
RXRBP28702 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RXRBP28702 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RXRBP28702 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RXRBP28702 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.04■□□□□ 0.8
RXRBP28702 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRBP28702 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.03■□□□□ 0.8
RXRBP28702 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.03■□□□□ 0.8
RXRBP28702 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.03■□□□□ 0.8
RXRBP28702 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC20.03■□□□□ 0.8
RXRBP28702 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.03■□□□□ 0.8
RXRBP28702 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.03■□□□□ 0.8
RXRBP28702 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.03■□□□□ 0.8
RXRBP28702 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRBP28702 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RXRBP28702 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRBP28702 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RXRBP28702 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRBP28702 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RXRBP28702 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC20.03■□□□□ 0.8
RXRBP28702 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC20.03■□□□□ 0.8
RXRBP28702 KLF2P1-201ENST00000447438 1042 ntBASIC20.03■□□□□ 0.8
RXRBP28702 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.03■□□□□ 0.8
RXRBP28702 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RXRBP28702 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC20.03■□□□□ 0.8
RXRBP28702 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.03■□□□□ 0.8
RXRBP28702 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRBP28702 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRBP28702 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RXRBP28702 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.03■□□□□ 0.8
RXRBP28702 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RXRBP28702 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RXRBP28702 KRT18P9-201ENST00000604826 1300 ntBASIC20.02■□□□□ 0.8
RXRBP28702 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms