Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.55■□□□□ 0.08
VARSP26640 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.55■□□□□ 0.08
VARSP26640 RARRES2P9-201ENST00000565168 469 ntBASIC15.55■□□□□ 0.08
VARSP26640 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.55■□□□□ 0.08
VARSP26640 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.55■□□□□ 0.08
VARSP26640 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.55■□□□□ 0.08
VARSP26640 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
VARSP26640 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
VARSP26640 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 AC026748.1-201ENST00000624349 3251 ntBASIC15.54■□□□□ 0.08
VARSP26640 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.54■□□□□ 0.08
VARSP26640 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
VARSP26640 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.54■□□□□ 0.08
VARSP26640 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
VARSP26640 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 GPS2P2-201ENST00000430745 888 ntBASIC15.54■□□□□ 0.08
VARSP26640 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.54■□□□□ 0.08
VARSP26640 FAM207CP-201ENST00000443486 507 ntBASIC15.54■□□□□ 0.08
VARSP26640 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.54■□□□□ 0.08
VARSP26640 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.54■□□□□ 0.08
VARSP26640 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
VARSP26640 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC15.54■□□□□ 0.08
VARSP26640 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.54■□□□□ 0.08
VARSP26640 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.54■□□□□ 0.08
VARSP26640 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.54■□□□□ 0.08
VARSP26640 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.54■□□□□ 0.08
VARSP26640 AP001059.3-201ENST00000619053 235 ntBASIC15.54■□□□□ 0.08
VARSP26640 AL358472.5-202ENST00000641448 1267 ntBASIC15.54■□□□□ 0.08
VARSP26640 AF228730.6-201ENST00000641497 218 ntBASIC15.54■□□□□ 0.08
VARSP26640 AC084121.3-201ENST00000641716 218 ntBASIC15.54■□□□□ 0.08
VARSP26640 AC105233.6-201ENST00000642093 218 ntBASIC15.54■□□□□ 0.08
VARSP26640 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.54■□□□□ 0.08
VARSP26640 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VARSP26640 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.54■□□□□ 0.08
VARSP26640 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.54■□□□□ 0.08
VARSP26640 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARSP26640 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.53■□□□□ 0.08
VARSP26640 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.53■□□□□ 0.08
VARSP26640 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.53■□□□□ 0.08
VARSP26640 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.53■□□□□ 0.08
VARSP26640 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 AC005034.1-201ENST00000426657 489 ntBASIC15.53■□□□□ 0.08
VARSP26640 AC055876.3-201ENST00000431496 288 ntBASIC15.53■□□□□ 0.08
VARSP26640 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.53■□□□□ 0.08
VARSP26640 RBPMS2P1-201ENST00000437762 623 ntBASIC15.53■□□□□ 0.08
VARSP26640 ALG1L8P-201ENST00000533887 760 ntBASIC15.53■□□□□ 0.08
VARSP26640 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.53■□□□□ 0.08
VARSP26640 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARSP26640 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms