Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 INTS10-208ENST00000520985 826 ntTSL 218.3■□□□□ 0.523e-6■■■□□ 14.8
U2AF2P26368 AC097641.3-201ENST00000613523 464 ntBASIC6.79□□□□□ -1.323e-6■■■□□ 14.8
U2AF2P26368 CCNL1-225ENST00000495471 772 ntTSL 21.78□□□□□ -2.129e-7■■■□□ 14.8
U2AF2P26368 CCNL1-223ENST00000481173 571 ntTSL 20.96□□□□□ -2.269e-7■■■□□ 14.8
U2AF2P26368 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.011e-6■■■□□ 14.8
U2AF2P26368 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.571e-6■■■□□ 14.8
U2AF2P26368 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.76□□□□□ -1.171e-6■■■□□ 14.8
U2AF2P26368 SDR39U1-221ENST00000556707 1196 ntTSL 227.78■■■□□ 2.048e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-209ENST00000554947 1203 ntTSL 227.43■■□□□ 1.988e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.38■■□□□ 1.498e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-216ENST00000556175 775 ntTSL 323.85■■□□□ 1.418e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-203ENST00000544691 1507 ntTSL 1 (best)21.89■■□□□ 1.098e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-218ENST00000556262 1960 ntTSL 221.57■■□□□ 1.048e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-210ENST00000555225 769 ntTSL 321.38■■□□□ 1.018e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.21■□□□□ 0.998e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-220ENST00000556548 2336 ntTSL 221.18■□□□□ 0.988e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.43■□□□□ 0.78e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-219ENST00000556523 735 ntTSL 319.29■□□□□ 0.688e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.688e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.7■□□□□ 0.428e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-217ENST00000556249 556 ntTSL 317.7■□□□□ 0.428e-10■■■□□ 14.8
U2AF2P26368 SDR39U1-215ENST00000555830 418 ntTSL 317.53■□□□□ 0.48e-10■■■□□ 14.8
U2AF2P26368 ACACA-236ENST00000615229 1468 ntTSL 1 (best)24.58■■□□□ 1.532e-13■■■□□ 14.8
U2AF2P26368 ACACA-246ENST00000621960 551 ntTSL 510.42□□□□□ -0.742e-13■■■□□ 14.8
U2AF2P26368 ACACA-228ENST00000613146 3974 ntTSL 1 (best)8.71□□□□□ -1.022e-13■■■□□ 14.8
U2AF2P26368 HNRNPK-211ENST00000493362 868 ntTSL 25.66□□□□□ -1.51e-7■■■□□ 14.8
U2AF2P26368 RPS6KB1-208ENST00000489824 909 ntTSL 321.38■■□□□ 1.017e-7■■■□□ 14.8
U2AF2P26368 PAPD4-215ENST00000514095 575 ntTSL 416.33■□□□□ 0.27e-7■■■□□ 14.8
U2AF2P26368 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.521e-6■■■□□ 14.8
U2AF2P26368 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.111e-6■■■□□ 14.8
U2AF2P26368 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)13.93□□□□□ -0.189e-16■■■□□ 14.8
U2AF2P26368 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.372e-7■■■□□ 14.8
U2AF2P26368 PLEKHA1-202ENST00000368989 3771 ntTSL 5 BASIC12.6□□□□□ -0.392e-8■■■□□ 14.8
U2AF2P26368 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.022e-8■■■□□ 14.8
U2AF2P26368 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.422e-8■■■□□ 14.8
U2AF2P26368 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC12.31□□□□□ -0.444e-7■■■□□ 14.8
U2AF2P26368 CTNND1-224ENST00000530068 579 ntTSL 412.01□□□□□ -0.497e-11■■■□□ 14.8
U2AF2P26368 CLDND1-216ENST00000507944 903 ntTSL 423.05■■□□□ 1.281e-9■■■□□ 14.8
U2AF2P26368 CLDND1-209ENST00000503621 539 ntTSL 419.56■□□□□ 0.721e-9■■■□□ 14.8
U2AF2P26368 CLDND1-217ENST00000508071 556 ntTSL 419.51■□□□□ 0.711e-9■■■□□ 14.8
U2AF2P26368 CLDND1-219ENST00000508659 681 ntTSL 319.02■□□□□ 0.641e-9■■■□□ 14.8
U2AF2P26368 CLDND1-231ENST00000515620 663 ntTSL 311.47□□□□□ -0.571e-9■■■□□ 14.8
U2AF2P26368 CLDND1-210ENST00000503799 569 ntTSL 52.63□□□□□ -1.991e-9■■■□□ 14.8
U2AF2P26368 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 01e-6■■■□□ 14.8
U2AF2P26368 SETD4-215ENST00000481477 2761 ntTSL 1 (best)14.68□□□□□ -0.061e-6■■■□□ 14.8
U2AF2P26368 SETD4-201ENST00000332131 3015 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.281e-6■■■□□ 14.8
U2AF2P26368 SETD4-206ENST00000399212 3258 ntTSL 1 (best) BASIC11.82□□□□□ -0.521e-6■■■□□ 14.8
U2AF2P26368 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.5■□□□□ 0.879e-7■■■□□ 14.8
U2AF2P26368 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.72■□□□□ 0.599e-7■■■□□ 14.8
U2AF2P26368 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.239e-7■■■□□ 14.8
U2AF2P26368 LRRFIP2-203ENST00000396428 1791 ntTSL 2 BASIC12.47□□□□□ -0.419e-7■■■□□ 14.8
U2AF2P26368 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.14□□□□□ -1.119e-7■■■□□ 14.8
U2AF2P26368 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.778e-9■■■□□ 14.8
U2AF2P26368 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.96□□□□□ -1.38e-9■■■□□ 14.8
U2AF2P26368 IDH3B-209ENST00000488299 1620 ntTSL 219.9■□□□□ 0.783e-11■■■□□ 14.8
U2AF2P26368 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.723e-11■■■□□ 14.8
U2AF2P26368 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.493e-11■■■□□ 14.8
U2AF2P26368 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.43e-11■■■□□ 14.8
U2AF2P26368 IDH3B-207ENST00000477689 608 ntTSL 514.96□□□□□ -0.013e-11■■■□□ 14.8
U2AF2P26368 IDH3B-204ENST00000466494 677 ntTSL 212.7□□□□□ -0.383e-11■■■□□ 14.8
U2AF2P26368 IDH3B-211ENST00000492240 964 ntTSL 511.23□□□□□ -0.613e-11■■■□□ 14.8
U2AF2P26368 HNRNPH1-207ENST00000503105 559 ntTSL 319.37■□□□□ 0.694e-33■■■□□ 14.8
U2AF2P26368 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC15.15■□□□□ 0.021e-8■■■□□ 14.8
U2AF2P26368 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC14.97□□□□□ -0.011e-8■■■□□ 14.8
U2AF2P26368 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.071e-8■■■□□ 14.8
U2AF2P26368 PLK4-201ENST00000270861 3841 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.281e-8■■■□□ 14.8
U2AF2P26368 PLK4-211ENST00000515069 3431 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.291e-8■■■□□ 14.8
U2AF2P26368 PLK4-207ENST00000510605 637 ntTSL 33.49□□□□□ -1.851e-8■■■□□ 14.8
U2AF2P26368 SS18L1-205ENST00000492466 899 ntTSL 516.4■□□□□ 0.221e-13■■■□□ 14.8
U2AF2P26368 PAQR7-201ENST00000374296 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.331e-7■■■□□ 14.8
U2AF2P26368 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.396e-13■■■□□ 14.8
U2AF2P26368 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.316e-13■■■□□ 14.8
U2AF2P26368 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.286e-13■■■□□ 14.8
U2AF2P26368 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.236e-13■■■□□ 14.8
U2AF2P26368 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.226e-13■■■□□ 14.8
U2AF2P26368 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.16e-13■■■□□ 14.8
U2AF2P26368 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.056e-13■■■□□ 14.8
U2AF2P26368 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.926e-13■■■□□ 14.8
U2AF2P26368 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.286e-13■■■□□ 14.8
U2AF2P26368 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.166e-13■■■□□ 14.8
U2AF2P26368 MARK2-213ENST00000540169 558 ntTSL 47.48□□□□□ -1.216e-13■■■□□ 14.8
U2AF2P26368 MARK2-214ENST00000543220 595 ntTSL 45.97□□□□□ -1.456e-13■■■□□ 14.8
U2AF2P26368 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.028e-8■■■□□ 14.8
U2AF2P26368 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.322e-6■■■□□ 14.8
U2AF2P26368 DERA-203ENST00000526521 745 ntTSL 323.41■■□□□ 1.342e-6■■■□□ 14.8
U2AF2P26368 DERA-204ENST00000526530 1619 ntTSL 1 (best) BASIC11.47□□□□□ -0.572e-6■■■□□ 14.8
U2AF2P26368 DERA-210ENST00000533447 819 ntTSL 510.19□□□□□ -0.782e-6■■■□□ 14.8
U2AF2P26368 DERA-207ENST00000531803 735 ntTSL 59.9□□□□□ -0.822e-6■■■□□ 14.8
U2AF2P26368 DERA-206ENST00000530274 712 ntTSL 29.08□□□□□ -0.962e-6■■■□□ 14.8
U2AF2P26368 DERA-205ENST00000528821 1113 ntTSL 26.86□□□□□ -1.312e-6■■■□□ 14.8
U2AF2P26368 DERA-202ENST00000524480 814 ntTSL 56.44□□□□□ -1.382e-6■■■□□ 14.8
U2AF2P26368 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.44□□□□□ -1.542e-6■■■□□ 14.8
U2AF2P26368 AC079416.3-201ENST00000624479 549 ntBASIC2.08□□□□□ -2.082e-6■■■□□ 14.8
U2AF2P26368 SCLY-212ENST00000446202 548 ntTSL 422.16■■□□□ 1.142e-6■■■□□ 14.8
U2AF2P26368 SCLY-216ENST00000480859 506 ntTSL 515.57■□□□□ 0.082e-6■■■□□ 14.8
U2AF2P26368 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.63■□□□□ 0.414e-9■■■□□ 14.8
U2AF2P26368 GHRLOS-203ENST00000605014 921 ntTSL 1 (best)13.5□□□□□ -0.254e-9■■■□□ 14.8
U2AF2P26368 GHRLOS-204ENST00000605105 950 ntTSL 1 (best)7.04□□□□□ -1.284e-9■■■□□ 14.8
U2AF2P26368 TTLL4-220ENST00000491899 589 ntTSL 49.63□□□□□ -0.872e-11■■■□□ 14.8
U2AF2P26368 GSAP-204ENST00000426477 543 ntTSL 413.95□□□□□ -0.182e-10■■■□□ 14.8
Retrieved 100 of 36,523 protein–RNA pairs in 337 ms