Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC26.17■■□□□ 1.78
CFTRP13569 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC26.17■■□□□ 1.78
CFTRP13569 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
CFTRP13569 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CFTRP13569 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 AC007881.3-201ENST00000608897 607 ntBASIC26.17■■□□□ 1.78
CFTRP13569 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFTRP13569 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFTRP13569 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CFTRP13569 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFTRP13569 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
CFTRP13569 AC074138.1-201ENST00000611182 1303 ntBASIC26.16■■□□□ 1.78
CFTRP13569 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC26.16■■□□□ 1.78
CFTRP13569 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
CFTRP13569 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
CFTRP13569 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFTRP13569 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CFTRP13569 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CFTRP13569 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CFTRP13569 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CFTRP13569 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC26.16■■□□□ 1.78
CFTRP13569 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC26.16■■□□□ 1.78
CFTRP13569 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC26.16■■□□□ 1.78
CFTRP13569 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CFTRP13569 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CFTRP13569 INE2-201ENST00000630399 1874 ntBASIC26.16■■□□□ 1.78
CFTRP13569 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC26.16■■□□□ 1.78
CFTRP13569 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
CFTRP13569 AC244394.1-201ENST00000435000 1665 ntBASIC26.15■■□□□ 1.78
CFTRP13569 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC26.15■■□□□ 1.78
CFTRP13569 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFTRP13569 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC26.15■■□□□ 1.78
CFTRP13569 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CFTRP13569 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFTRP13569 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFTRP13569 AL008718.2-201ENST00000609206 1313 ntBASIC26.15■■□□□ 1.78
CFTRP13569 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
CFTRP13569 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFTRP13569 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CFTRP13569 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CFTRP13569 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
CFTRP13569 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFTRP13569 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFTRP13569 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CFTRP13569 RN7SKP230-201ENST00000365642 335 ntBASIC26.15■■□□□ 1.78
CFTRP13569 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC26.15■■□□□ 1.78
CFTRP13569 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC26.15■■□□□ 1.78
CFTRP13569 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
CFTRP13569 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CFTRP13569 AC011840.2-201ENST00000563063 1520 ntBASIC26.15■■□□□ 1.78
CFTRP13569 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC26.15■■□□□ 1.78
CFTRP13569 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
CFTRP13569 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC26.14■■□□□ 1.78
CFTRP13569 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFTRP13569 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CFTRP13569 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFTRP13569 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFTRP13569 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CFTRP13569 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFTRP13569 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CFTRP13569 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC26.14■■□□□ 1.78
CFTRP13569 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFTRP13569 AC239868.1-201ENST00000369385 493 ntBASIC26.14■■□□□ 1.78
CFTRP13569 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFTRP13569 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC26.14■■□□□ 1.78
CFTRP13569 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC26.14■■□□□ 1.78
CFTRP13569 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
CFTRP13569 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC26.14■■□□□ 1.78
CFTRP13569 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC26.14■■□□□ 1.78
CFTRP13569 AL157813.1-201ENST00000612996 587 ntBASIC26.14■■□□□ 1.78
CFTRP13569 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CFTRP13569 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
CFTRP13569 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
CFTRP13569 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CFTRP13569 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC26.13■■□□□ 1.77
CFTRP13569 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CFTRP13569 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC26.13■■□□□ 1.77
CFTRP13569 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC26.13■■□□□ 1.77
CFTRP13569 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC26.13■■□□□ 1.77
CFTRP13569 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC26.13■■□□□ 1.77
CFTRP13569 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC26.13■■□□□ 1.77
CFTRP13569 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 CAP2P1-201ENST00000557743 1390 ntBASIC26.13■■□□□ 1.77
CFTRP13569 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC26.13■■□□□ 1.77
CFTRP13569 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC26.13■■□□□ 1.77
CFTRP13569 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFTRP13569 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC26.12■■□□□ 1.77
CFTRP13569 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CFTRP13569 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CFTRP13569 AC097065.1-201ENST00000425737 517 ntBASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms