Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 LINC00554-201ENST00000564841 3011 ntBASIC16.6■□□□□ 0.25
KRT3P12035 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT3P12035 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT3P12035 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KRT3P12035 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KRT3P12035 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
KRT3P12035 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT3P12035 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
KRT3P12035 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
KRT3P12035 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
KRT3P12035 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT3P12035 METTL21AP1-201ENST00000438852 635 ntBASIC16.59■□□□□ 0.25
KRT3P12035 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT3P12035 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT3P12035 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.59■□□□□ 0.25
KRT3P12035 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT3P12035 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.59■□□□□ 0.25
KRT3P12035 AC006538.3-201ENST00000612495 578 ntBASIC16.59■□□□□ 0.25
KRT3P12035 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT3P12035 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT3P12035 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT3P12035 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT3P12035 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
KRT3P12035 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT3P12035 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT3P12035 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT3P12035 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT3P12035 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT3P12035 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KRT3P12035 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.58■□□□□ 0.25
KRT3P12035 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT3P12035 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT3P12035 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT3P12035 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KRT3P12035 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT3P12035 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT3P12035 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT3P12035 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT3P12035 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT3P12035 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT3P12035 AC027369.6-201ENST00000525520 931 ntBASIC16.58■□□□□ 0.24
KRT3P12035 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT3P12035 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT3P12035 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT3P12035 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT3P12035 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT3P12035 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.58■□□□□ 0.24
KRT3P12035 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT3P12035 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT3P12035 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT3P12035 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT3P12035 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT3P12035 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT3P12035 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT3P12035 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT3P12035 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT3P12035 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT3P12035 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT3P12035 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT3P12035 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms