Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
P04436 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
P04436 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
P04436 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
P04436 AC098850.1-201ENST00000419919 790 ntBASIC14.35□□□□□ -0.11
P04436 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.35□□□□□ -0.11
P04436 INE1-201ENST00000456273 945 ntBASIC14.35□□□□□ -0.11
P04436 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.35□□□□□ -0.11
P04436 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.35□□□□□ -0.11
P04436 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.35□□□□□ -0.11
P04436 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.35□□□□□ -0.11
P04436 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.35□□□□□ -0.11
P04436 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.35□□□□□ -0.11
P04436 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.35□□□□□ -0.11
P04436 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.35□□□□□ -0.11
P04436 AC133539.2-201ENST00000604757 467 ntBASIC14.35□□□□□ -0.11
P04436 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.35□□□□□ -0.11
P04436 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.35□□□□□ -0.11
P04436 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
P04436 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.35□□□□□ -0.11
P04436 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.35□□□□□ -0.11
P04436 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
P04436 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04436 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
P04436 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.34□□□□□ -0.11
P04436 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
P04436 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P04436 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
P04436 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
P04436 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.34□□□□□ -0.11
P04436 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 AL133267.1-201ENST00000398220 340 ntBASIC14.34□□□□□ -0.11
P04436 AL512384.1-201ENST00000406683 331 ntBASIC14.34□□□□□ -0.11
P04436 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
P04436 AL442647.2-201ENST00000429864 857 ntBASIC14.34□□□□□ -0.11
P04436 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.34□□□□□ -0.11
P04436 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.34□□□□□ -0.11
P04436 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.34□□□□□ -0.11
P04436 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.34□□□□□ -0.11
P04436 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.34□□□□□ -0.11
P04436 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.34□□□□□ -0.11
P04436 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
P04436 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.34□□□□□ -0.11
P04436 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.34□□□□□ -0.11
P04436 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.34□□□□□ -0.11
P04436 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.34□□□□□ -0.11
P04436 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.34□□□□□ -0.11
P04436 WFDC1-204ENST00000613603 549 ntBASIC14.34□□□□□ -0.11
P04436 AL033527.5-201ENST00000641382 801 ntBASIC14.34□□□□□ -0.11
P04436 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
P04436 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 AL121723.1-201ENST00000445194 1519 ntBASIC14.34□□□□□ -0.11
P04436 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
P04436 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.34□□□□□ -0.11
P04436 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.34□□□□□ -0.11
P04436 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P04436 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
P04436 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04436 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
P04436 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
P04436 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
P04436 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
P04436 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.33□□□□□ -0.11
P04436 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
P04436 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms