Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
MT-ND3P03897 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.11■□□□□ 0.17
MT-ND3P03897 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.11■□□□□ 0.17
MT-ND3P03897 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.11■□□□□ 0.17
MT-ND3P03897 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.11■□□□□ 0.17
MT-ND3P03897 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
MT-ND3P03897 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 C18orf15-201ENST00000623680 2534 ntBASIC16.11■□□□□ 0.17
MT-ND3P03897 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-ND3P03897 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-ND3P03897 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
MT-ND3P03897 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-ND3P03897 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.1■□□□□ 0.17
MT-ND3P03897 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-ND3P03897 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.1■□□□□ 0.17
MT-ND3P03897 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.1■□□□□ 0.17
MT-ND3P03897 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.1■□□□□ 0.17
MT-ND3P03897 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.1■□□□□ 0.17
MT-ND3P03897 AC004449.1-201ENST00000564240 433 ntBASIC16.1■□□□□ 0.17
MT-ND3P03897 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.1■□□□□ 0.17
MT-ND3P03897 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND3P03897 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MT-ND3P03897 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-ND3P03897 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND3P03897 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
MT-ND3P03897 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND3P03897 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND3P03897 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MT-ND3P03897 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 AC140658.5-201ENST00000438532 169 ntBASIC16.09■□□□□ 0.17
MT-ND3P03897 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.09■□□□□ 0.17
MT-ND3P03897 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MT-ND3P03897 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.09■□□□□ 0.17
MT-ND3P03897 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.09■□□□□ 0.17
MT-ND3P03897 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.09■□□□□ 0.17
MT-ND3P03897 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.09■□□□□ 0.17
MT-ND3P03897 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms